Changed config name to user-specific one

comsdk/communication.py

@@ -159,7 +159,7 @@ class LocalCommunication(BaseCommunication):
 
     @classmethod
     def create_from_config(cls):
-        with open('config_research.json', 'r') as f:
+        with open(os.path.expanduser('~/.comsdk/config_research.json'), 'r') as f:
             conf = json.load(f)
         local_host = Host()
         _add_programs_and_commands_from_config(local_host, conf['LOCAL_HOST'])
@@ -212,7 +212,7 @@ class SshCommunication(BaseCommunication):
 
     @classmethod
     def create_from_config(cls, host_sid):
-        with open('config_research.json', 'r') as f:
+        with open(os.path.expanduser('~/.comsdk/config_research.json'), 'r') as f:
             conf = json.load(f)
         hostconf = conf['REMOTE_HOSTS'][host_sid]
         remote_host = RemoteHost(ssh_host=hostconf['ssh_host'],

comsdk/edge.py

@@ -437,7 +437,7 @@ def build_args_line(data, keyword_names, flag_names, trailing_args_keys):
 
 
 def render_sge_template(sge_template_name, sge_script_path, cores, time, commands):
-    with open('config_research.json', 'r') as f:
+    with open(os.path.expanduser('~/.comsdk/config_research.json'), 'r') as f:
         conf = json.load(f)
     sge_templ_path = os.path.join(conf['TEMPLATES_PATH'], sge_template_name)
     if not os.path.exists(sge_templ_path): # by default, templates are in templates/, but here we let the user put any path

comsdk/research.py

@@ -89,7 +89,7 @@ class Research:
         :param remote_comm: BaseCommunication instance used for communication with remote machine
         :return: new Research instance
         """
-        with open('config_research.json', 'r') as f:
+        with open(os.path.expanduser('~/.comsdk/config_research.json'), 'r') as f:
             conf = json.load(f)
         res = Research(conf['RESEARCH'][research_id],
                        continuing=True,
@@ -109,7 +109,7 @@ class Research:
         :param remote_comm: BaseCommunication instance used for communication with remote machine
         :return: new Research instance
         """
-        with open('config_research.json', 'r+') as f:
+        with open(os.path.expanduser('~/.comsdk/config_research.json'), 'r+') as f:
             conf = json.load(f)
             conf['RESEARCH'][new_research_id] = make_suitable_research_dir(new_research_descr)
             f.seek(0)